Humpback Whales greeting cruise guests in inflatable zodiacs in Baja Mexico

Baja California: Observing the Whales of Magdalena Bay

At a glance

Duration:
6 Days
Start/End:
Round Trip San Carlos
From:
$3,000
Time of Year:
January - March
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Lindblad Expeditions

Embark on a 6-day Baja California: Observing the Whales of Magdalena Bay adventure, where each day brings you closer to one of the most extraordinary wildlife encounters on Earth. In the protected waters of Magdalena Bay, renowned as one of the world’s premier gray whale nurseries, you’ll spend unhurried time with these gentle giants, watching mothers nurture their calves and marveling as curious whales approach for a closer look.

This compact expedition unfolds aboard the only expedition ship in the region nimble enough to anchor deep inside the bay’s sheltered waters, granting you unrivaled access to this vibrant marine sanctuary. From here, head out in local pangas for thrilling, up-close encounters with whales, glide silently through mangrove forests by kayak, hike across sun-baked desert islands, and watch for pelicans, ospreys, and other coastal wildlife. Between adventures, relax on pristine beaches under Baja’s golden sun.

With more than five decades of exploration expertise, Lindblad Expeditions is known for its extraordinary staff, a team of expedition leaders, naturalists, and guest experts whose passion is matched only by their knowledge. Many hold advanced degrees and are recognized authorities in their fields, splitting their time between academic work and time in the field. Whether they’re guiding you through a mangrove channel or sharing insight over dinner, their enthusiasm is infectious, so much so that many guests say, “Where you’re going, we’re going,” returning again and again to travel with them.

Baja California: Observing the Whales of Magdalena Bay Highlights

  • Search for gray whale mothers and their calves aboard Zodiacs and local pangas, delighting in up-close encounters
  • Kayak and paddleboard stunning mangroves, or beachcomb along endless beaches
  • Explore diverse landscapes, and ride a fat-tire bike along desert island terrain
  • Scan the skies for bird species, from diving pelicans to magnificent frigatebirds
  • Learn about desert ecosystems, seabird migrations, and whale behavior from our experienced naturalists
  • With National Geographic Global Explorers, our exclusive family program, kids and teens will learn about this vibrant part of the world—from migrating gray whales to desert plant species

Baja California: Observing the Whales of Magdalena Bay Details

Day-to-Day Itinerary

Day 1: Loreto, Mexico / San Carlos / Embark Ship

Arrive in Loreto by early afternoon for the transfer to San Carlos, a small waterside town where the mountains meet the Gulf of California. Embark the ship this evening in time for cocktails and an introduction to the staff and crew. You may opt for a pre-voyage extension exploring the region’s culture and cuisine.

Arrival Time: Arrive before 2:30 p.m. local time.
Arrival City: Loreto, Mexico

Meals Included: Dinner


Days 2-5: Magdalena Bay

Below is a selection of locales you may visit during your expedition. 

Bahía Almejas

The southernmost of the waters you’ll explore, Bahía Almejas, or Bay of Clams, is known for its many seabird species and its remarkably active gray whale populations. With luck, you’ll have the opportunity to view a large frigatebird colony before heading out on a whale-watching trip. Board small, open boats called pangas, operated by pangueros—expert local guides. The areas around Magdalena Bay are primarily supported by whale-watching and small-scale, artisanal fishing; the pangueros make their livings as fishermen outside the gray whale season and have a deep familiarity with these rich waters.

Isla Magdalena / Sand Dollar Beach

Explore ever-shifting sand dunes on a cross-island walk to one of the most pristine beaches in the Pacific. Take in the impressive desert plant life of this exotic terrain, home to five species of cacti. Tally treasures offered up by the ocean on the aptly named Sand Dollar Beach, and capture images of your discoveries with the help of your certified photo instructor.

Puerto Magdalena

Wake up anchored at this small fishing village, surrounded by the open Pacific to the west, Magdalena Bay to the east, mangroves to the north and mountains to the south. With a population of 85, Puerto Magdalena is the only inhabited area of Isla Magdalena. Meet a local resident and learn how his family has lived off the area since the 1800s—from lichen harvesting to managing an open-air cantina, where you’ll enjoy local bites and beverages. Time permitting, visit the desalinization plant that supplies fresh water to the community. Get active on a fat-tire bike ride or, conditions and tide permitting, a kayaking excursion through the mangroves in Man of War Cove.

Hull Canal

Take in the scenery and watch for pods of bow-riding dolphins as the ship navigates this winding canal. Within its narrow channels, bordered by mangroves and sand dunes and filled with abundant wildlife, join your keen-eyed naturalists on deck to spot species and hear expert commentary. Weather permitting, explore the vast mangrove system by kayak and Zodiac. Bird-watching can be excellent here, with various seabirds and shorebirds patrolling the beaches as they fatten up and prepare for long journeys to their summer breeding grounds. You might see anything from diving pelicans and wheeling cormorants to terns, great blue herons, ibis, whimbrels and willets.

Boca de Soledad

Settle in for unforgettable experiences in this tranquil lagoon. Each winter, during their long migration, gray whales travel south from their Arctic feeding grounds to breed and give birth to their calves in these sheltered waters. Venture out in local pangas to view the numerous mother-calf pairs that thrive in the region. With luck, enjoy up-close interactions with these curious creatures.

Meals Included: Breakfast, Lunch, Dinner


Day 6: San Carlos / Disembark Ship / Loreto

After breakfast, disembark the ship and transfer to the Loreto airport for flights home or to Loreto’s city center to begin your two-night history and whale-watching extension.

Departure Time: Depart after 1:00 p.m. local time.
Departure City: Loreto, Mexico

Meals Included: Breakfast


Lindblad Expeditions The Whales of Magdalena Bay itinerary map

Dates & Rates

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Dates & Rates - Mexico - LEX - Wild Baja Escape: The Whales of Magdalena Bay
DatesShipCat. 1Cat. 2Cat. 3
Wednesday, January 14, 2026NG Sea Lion$3,155$3,906$4,518
Saturday, January 17, 2026NG Sea Bird$3,155$3,906$4,518
Monday, January 19, 2026NG Sea Lion$3,155$3,906$4,518
Thursday, January 22, 2026NG Sea Bird$3,155$3,906$4,518
Saturday, January 24, 2026NG Sea Lion$3,649$4,514$5,224
Thursday, January 29, 2026NG Sea Lion$3,649$4,514$5,224
Sunday, February 1, 2026NG Sea Bird$4,548$5,629$6,511
Tuesday, February 3, 2026NG Sea Lion$3,649$4,514$5,224
Friday, February 6, 2026NG Sea Bird$4,785$5,919$6,850
Sunday, February 8, 2026NG Sea Lion$3,649$4,514$5,224
Wednesday, February 11, 2026NG Sea Bird$5,008$6,195$7,170
Friday, February 13, 2026NG Sea Lion$3,649$4,514$5,224
Monday, February 16, 2026NG Sea Bird$5,008$6,195$7,170
Wednesday, February 18, 2026NG Sea Lion$3,000$3,787$4,379
Saturday, February 21, 2026NG Sea Bird$4,785$5,919$6,850
Monday, February 23, 2026NG Sea Lion$3,000$3,787$4,379
Thursday, February 26, 2026NG Sea Bird$3,333$4,123$4,772
Saturday, February 28, 2026NG Sea Lion$3,000$3,787$4,379
Tuesday, March 3, 2026NG Sea Bird$3,750$4,734$5,474
Thursday, March 5, 2026NG Sea Lion$2,524$3,124$3,614
Sunday, March 8, 2026NG Sea Bird$3,934$4,966$5,742
Friday, March 13, 2026NG Sea Bird$3,750$4,734$5,474
Tuesday, January 26, 2027NG Sea Bird$4,151$5,135$5,941
Sunday, January 31, 2027NG Sea Bird$4,151$5,135$5,941
Friday, February 5, 2027NG Sea Bird$4,850$6,002$6,946
Wednesday, February 10, 2027NG Sea Bird$4,850$6,002$6,946
Monday, February 15, 2027NG Sea Bird$4,850$6,002$6,946
Saturday, February 20, 2027NG Sea Bird$4,850$6,002$6,946
Thursday, February 25, 2027NG Sea Bird$4,850$6,002$6,946
Tuesday, March 2, 2027NG Sea Bird$3,947$4,982$5,757
Sunday, March 7, 2027NG Sea Bird$3,947$4,982$5,757
Friday, March 12, 2027NG Sea Bird$3,947$4,982$5,757

Dates and rates are effective the date the information was updated on this site. Dates and rates may have changed by the cruise line prior to an update here. Contact Sunstone Tours & Cruises for the latest dates & rates.

Prices are per person, double occupancy.

Prices subject to change

Included

  • Excursions, hotels, and airport transfers, as indicated in itinerary
  • Kayaks, Zodiac cruises, stand-up paddleboards, full complement of snorkeling gear, glass-bottom boat rides, where relevant
  • Guidance and expertise of expedition staff
  • All meals as indicated in itinerary
  • Beer, wine, non-alcoholic beverages, hors d’oeuvres, and snacks
  • Cocktails and spirits on select ships
  • Park and site entrance fees, special access permits, and port taxes
  • 24-hour access to shared spaces, such as the lounges and fitness centers
  • Complimentary WiFi, with the exception of Delfin II.

Not Included

  • Airfare (except flights when indicated as included), expedition extensions, additional hotel nights, and private transfers
  • Travel protection plan, passport, visa, and immigration fees
  • Laundry, spa treatments, scuba diving and phone services (except when indicated as included)

Ships

National Geographic Sea Bird

National Geographic Sea Bird

The 62-passenger National Geographic Sea Bird is a tried and true expedition ship. With a shallow draft and small size, she can easily reach places inaccessible to larger ships.

National Geographic Sea Bird Details …


National Geographic Sea Lion

National Geographic Sea Lion

The 62-passenger National Geographic Sea Lion is a tried and true expedition ship. With a shallow draft and small size, she can easily reach places inaccessible to larger ships.

National Geographic Sea Lion Details …